Journal: bioRxiv
Article Title: Citrate Compartmentalization Controls Calcium-Dependent Cytokine Production in Effector T Cells
doi: 10.64898/2026.06.11.731694
Figure Lengend Snippet: ( A-D ) Barplots depict percent IL-2 + ( A ), IFN-γ + ( B ), TNF-α + ( C ), and polyfunctional (IL-2 + IFN-γ + TNF-α + ) ( D ) of live CD8 + T cells after 72 hours of polyclonal activation on plate-bound α-CD3/ α-CD28 in glucose or galactose at the indicated concentrations. ( E-F ) Oxygen consumption rate (OCR) as measured during the Seahorse XF Cell Mito Stress Test on CD8 + T cells after 72 hours of polyclonal activation on plate-bound α-CD3/ α-CD28 in glucose or galactose at the indicated concentrations ( E ). Barplot depicts baseline OCR ( F ). Seahorse assay medium contained the same sugar source as the activation condition. ( G-H ) Extracellular Acidification Rate (ECAR) as measured during the Seahorse XF Cell Mito Stress Test on CD8 + T cells after 72 hours of polyclonal activation on plate-bound α-CD3/ α-CD28 in glucose or galactose at the indicated concentrations ( G ). Barplot depicts baseline ECAR ( H ). Seahorse assay medium contained the same sugar source as the activation condition. ( I ) Diagram depicting the fates of citrate produced in the mitochondria. ( J-L ) Metabolomics analysis on CD8 + T cells after 72 hours of activation on plate-bound α-CD3/ α-CD28 in high (10 mM) versus low (1.5 mM) glucose measured by liquid chromatography-mass spectrometry (LC-MS). Barplots depict ratios of peak areas for citrate to α-ketoglutarate ( J ), α-ketoglutarate to malate ( K ), or citrate to malate ( L ). ( M ) Media citrate levels by LC-MS after culturing CD8 + T cells for 24, 48, and 72 hours on plate-bound α-CD3/ α-CD28 in high (10 mM) versus low (1.5 mM) glucose, compared to cell-free controls. ( N ) Percent IL-2 + of live CD8 + T cells after 72 hours of polyclonal activation on plate-bound α-CD3/ α-CD28 in high (10 mM) versus low (1.5 mM) glucose with varying concentrations of dichloroacetate or vehicle control. ( O ) Percent IL-2 + of live CD8 + T cells after 72 hours of polyclonal activation on plate-bound α-CD3/ α-CD28 in high (10 mM) versus low (1.5 mM) glucose with varying concentrations of the mitochondrial pyruvate carrier (MPC) inhibitor UK-5099 or vehicle control. ( P ) Ratio of extracellular lactate to pyruvate levels measured in culture media of CD8 + T cells after 24, 48, and 72 hours of activation on plate-bound α-CD3/ α-CD28 in high (10 mM) versus low (1.5 mM) glucose, compared to cell-free controls. ( Q-R ) Percent IL-2 + of live CD8 + T cells after 72 hours of polyclonal activation on plate-bound α-CD3/ α-CD28 in high (10 mM) versus low (1.5 mM) glucose with varying concentrations of the mitochondrial citrate carrier inhibitor (SLC25A1) inhibitor CTPI-2 or vehicle control ( Q ). Representative flow cytometry histograms of IL-2 signal after 72 hours of activation with CTPI-2 or vehicle control, including an un-stimulated naïve control ( R ). ( S ) Percent IL-2 + of live CD8 + T cells after 72 hours of polyclonal activation on plate-bound α-CD3/ α-CD28 in high (10 mM) versus low (1.5 mM) glucose with varying concentrations of sodium citrate. ( T-V ) Metabolomics analysis on CD8 + T cells after 72 hours of activation on plate-bound α-CD3/ α-CD28 in high (10 mM) versus low (1.5 mM) glucose with SLC25A1 inhibition by CTPI-2. Barplots depict ratios of peak areas for citrate to α-ketoglutarate ( T ), α-ketoglutarate to malate ( U ), or citrate to malate ( V ). Abbreviations : Ac-CoA = Acetyl-Coenzyme A; αKG = Alpha-Ketoglutarate; CTPI-2 = Inhibitor of the Mitochondrial Citrate Carrier SLC25A1; DCA = Dichloroacetate; ECAR = Extracellular Acidification Rate; Gal = Galactose; Glc = glucose; IFN-γ = Interferon Gamma; Lac = Lactate; OCR = Oxygen Consumption Rate; Pyr = Pyruvate; TCA cycle = Tricarboxylic Acid cycle; TNF-α = Tumor Necrosis Factor Alpha; UK-5099 = Inhibitor of Mitochondrial Pyruvate Carrier Statistics : Data are presented as mean ± standard deviation (A-D, F, H, J-Q, S-V). Panels A-D contain data aggregated from 5 independent experiments with n=15 biological replicates. Panels E-H contain data aggregated from 3 biological replicates with 5 technical replicates each. Panels J-L contain data aggregated from 2 independent experiments with n=6 biological replicates. Panels M and P contain data aggregated from 4 biological replicates. Panels N-O, S, and T-V show data representative of two independent experiments where n=3 biological replicates are shown from a representative experiment. Panels Q-R contain data aggregated from 3 independent experiments with n=7 biological replicates. Statistical significance assessed by one-way ANOVA (A-D, F, H), Student’s t-test (J-L), or two-way ANOVA (M-Q, S-V). P-values: not significant (ns) for p>0.05, ∗ for p≤0.05, ∗∗ for p≤0.01, ∗∗∗ for p≤0.001, and ∗∗∗∗ for p≤0.0001.
Article Snippet: Where indicated, JAXBoy-OT-I T cells were alternatively activated with 1 μg/mL of SIINFEKL peptide derived from hen egg white ovalbumin corresponding to amino acids 257-264 (AnaSpec, AS-60193-1) and 12.5 ng/mL of murine IL-2 (Miltenyi Biotec, 130-120-330).
Techniques: Activation Assay, Produced, Liquid Chromatography, Mass Spectrometry, Liquid Chromatography with Mass Spectroscopy, Control, Flow Cytometry, Inhibition, Standard Deviation